PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g433490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 729aa MW: 83490.2 Da PI: 6.8683

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g433490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.6	1.3e-20	53	146	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel Pd.00g433490.m01 53 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSEDGKMQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNHEL 145 6*************9998874556679***************9***************98887676789***********9 PP FAR1 90 a 90 Pd.00g433490.m01 146 L 146 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK 60 QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR 120 IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSI STDDKSRICM FAKAGMSVRQ 180 MLRLMELEKG VKLGCLPFTE IDVRNLLQSF RNVDRDNDAI DLIAMCKKMK DENPNFKYEF 240 KIDGHNRLEH IAWSYASSVQ LYEAFGDTTV FDTTHRLDAY DMLLGIWLGV DNHGMTCFFG 300 CVLLQDENIQ SFSWALKTFL GFMKGKAPQT MLTDHNMWLK EAIAVDMPQS KHAFCIWHIV 360 AKFSDWFSVL LGSRYDDWKA EFHRLFNLDF VKDFEERWRE MVNEFGLHTN KHVISLYALR 420 NFWALAYLRH YFFAEMMSAS QAESINAFIQ RFLSAQSQLD RFVEQVADIV DYNDRVGAKQ 480 KMQRKMQRVC LKTGSPIESH AASVLTPYAF GKLQEELVLA PQYASLLVDE GCFQVRHHTE 540 EDGGCKVVWI PCQGHISCSC YQFEFSGILC RHVLRVLSTN NCFHIPDQYL PTRWCGVSSS 600 STNTFETATM KDNSEKIHLL ESLASTLVTE SVETEDRLDA ACEQIAMALS RVKDLPRTTH 660 NAIDIAYNCP SESLILQDVE EADGIIRFTV GNSHESVTLG KLKERRPRDI VEIGRKRRHC 720 SGPCCLSVQ

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK  60
QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR  120
IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSI STDDKSRICM FAKAGMSVRQ  180
MLRLMELEKG VKLGCLPFTE IDVRNLLQSF RNVDRDNDAI DLIAMCKKMK DENPNFKYEF  240
KIDGHNRLEH IAWSYASSVQ LYEAFGDTTV FDTTHRLDAY DMLLGIWLGV DNHGMTCFFG  300
CVLLQDENIQ SFSWALKTFL GFMKGKAPQT MLTDHNMWLK EAIAVDMPQS KHAFCIWHIV  360
AKFSDWFSVL LGSRYDDWKA EFHRLFNLDF VKDFEERWRE MVNEFGLHTN KHVISLYALR  420
NFWALAYLRH YFFAEMMSAS QAESINAFIQ RFLSAQSQLD RFVEQVADIV DYNDRVGAKQ  480
KMQRKMQRVC LKTGSPIESH AASVLTPYAF GKLQEELVLA PQYASLLVDE GCFQVRHHTE  540
EDGGCKVVWI PCQGHISCSC YQFEFSGILC RHVLRVLSTN NCFHIPDQYL PTRWCGVSSS  600
STNTFETATM KDNSEKIHLL ESLASTLVTE SVETEDRLDA ACEQIAMALS RVKDLPRTTH  660
NAIDIAYNCP SESLILQDVE EADGIIRFTV GNSHESVTLG KLKERRPRDI VEIGRKRRHC  720
SGPCCLSVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein