PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g433200.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 377aa MW: 41707.3 Da PI: 5.1124 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.2e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l ++++++G g+W++ ++ g+ R++k+c++rw +yl Pd.00g433200.m01 14 RGRWTAEEDEILTNYIQLHGEGSWRSLPNNAGLLRCGKSCRLRWINYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.7 | 4.9e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e +v++++ +G++ W+ Ia++++ gRt++++k++w+++l Pd.00g433200.m01 67 RGNITAEEEETIVKLHTAMGNR-WSFIAAHLP-GRTDNEIKNYWNSHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MGRAPCCEKL GLKRGRWTAE EDEILTNYIQ LHGEGSWRSL PNNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TAEEEETIVK LHTAMGNRWS FIAAHLPGRT DNEIKNYWNS HLSRKIYTFT 120 NLGKNYLPTI TNVGKKTAAS FKDRRAAARA NRSSIMNNNK NVLSPSPQRS QAKPQQSGTN 180 IADHVVLQLE PSARENQKGD EAIRMLGLKG SCLDSTERIN LDHCGDQKEG AELCLGNKVN 240 ITSSTVLSGD NNGEKEVLGL CECVESEIMG LESGVVDPSG NIGFKEQRED GIIMEGNITD 300 EVTKSEGRES TSLWSSNAES GSGELYSFSS SLNSAFDDEW LSWGWAGGFE CHNELELWDE 360 GESIAWLWES GSTGEGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 1e-73 | MYB family protein |