PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g426960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 312aa MW: 35122.9 Da PI: 5.1629 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.3 | 7.5e-13 | 11 | 56 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ vk+ G+++W++I ++ + Rt+k+c++rw + Pd.00g426960.m01 11 KGPWKAEEDEVLLNHVKKCGPRDWSSIRSKGLLQRTGKSCRLRWVN 56 79*************************8887799**********87 PP | |||||||
2 | Myb_DNA-binding | 42.2 | 1.9e-13 | 67 | 106 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++ eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w Pd.00g426960.m01 67 KFSLEEERVVIDLQAQFGNK-WARIATYLP-GRTDNDVKNFW 106 799*****************.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MEGRREEGIR KGPWKAEEDE VLLNHVKKCG PRDWSSIRSK GLLQRTGKSC RLRWVNKLRP 60 NLKNGCKFSL EEERVVIDLQ AQFGNKWARI ATYLPGRTDN DVKNFWSSRQ KRLARILQAS 120 APSKSHKNKR EGPVYDEVLT LEAPKFSCSS EGESSSQAQS CSSPPCFGNS EIIKMVPLPD 180 LVKPKLLALE ANPVQQELAP TEKNPWIDPQ PLIPFLQNPQ PQTDLEFSLE TQELLARFDP 240 YFDMLTPLVA SELGNGGEQL LMEPPFLEPV GSCGSGERDK IGNPITPDCV FDDLPVDMFD 300 QIELLPNSSE QH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 3e-71 | MYB family protein |