PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g424680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 323aa    MW: 34791.5 Da    PI: 7.7069
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g424680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-1297141347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
  Pd.00g424680.m01  97 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 141
                       8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSHYAGS SSGGLHPNNP  60
GSPGDTTNDH AGAADGYASE DFVPGSSSSR ERKKGTPWTE EEHRMFLLGL QKLGKGDWRG  120
IARNYVISRT PTQVASHAQK YFIRQTNVSR RKRRSSLFDI VADDSVEAPM EPLDFLPGNN  180
LQAESQSNNP LPAPPALDEE CESMDSTNSD GEPGPPQPDS SQSFYPMIYP AFFSPFPVPF  240
PLWPGYSTAP TKQDKHEVLK PTAVHSKSPI NVDELVGMSK LSLGEPIGHS GPSSLTLKLV  300
EGSSRQSAFH ANPGSGSSSM NSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-121MYB_related family protein