PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g424090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 381aa    MW: 42213 Da    PI: 8.8281
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g424090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.51.1e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +grWT+eEd++l+++++  G g+W++ ++  g+ R++k+c++rw +yl
  Pd.00g424090.m01 14 KGRWTAEEDQILINYIQTNGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                      79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MGRAPCCDKI GLKKGRWTAE EDQILINYIQ TNGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI SAQEEDIIIK LHASLGNSLE PAAVGCWRWG MLKLKYIGLR AFTIIGEQHS  120
FISSAVKLRI DNPLSARALS CITTFPRSFN SSPSEDDDYS ELGSPVSKAP SNPRKLMTEK  180
PEPYMKTNRK KKLSGKPSKS SISSKDVSSK WESSRRASLD LEVITKGFDL PIHPPDDQEE  240
VTIRITNINS ETSDSAVRSM CMSCGSLEGV VRTKADAVDA LFSVKDNMGI QSLIRKLNQM  300
VVNDHKWSAN LHSRDSAPAV TSKQINANCD LGLDISRHLG DLRSQISAKT VCIEDLEYLH  360
NALLHLEAQP DRSSSIPNSD S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.11e-48MYB family protein