PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g418790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 391aa    MW: 42207.4 Da    PI: 5.9937
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g418790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.92.4e-17294327134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Pd.00g418790.m01 294 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 327
                       99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MCVVYEFHGS GQVIRTITTM IGGSEFEFKT KTQQDNFSET MIGPNFIDEI DCGSFFDTID  60
DLLDFPNDDV ESGLGPAPDC NAAFNNSLWP NQSGSLPAPN DAVFSAGNSA SDLSAELSVP  120
IEDIVQLEWL SNFVEDSFSG GSLTINKPDS FINKDTSHHQ FQTSSPISVL DSSSSCSGDK  180
NVPQSPGPVA APGKRGRARS KRPRPATFNP RPAIQLISPA SSVTEAEGPQ AQPFLAPKVP  240
SDSENFAESR PVIKIPKQAS GEQKKKKKLK VSLPLAPLEG NQNSGPTQAA VRKCLHCEIT  300
KTPQWRAGPM GPKTLCNACG VRYKSGRLFP EYRPAASPTF VPSLHSNSHK KVLEMRTKGG  360
ELVVFGETAT AMNETPELIP NTNRSISMDY M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1201205KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.16e-46GATA family protein