PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g412120.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 372aa MW: 38644.8 Da PI: 6.5233 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 113.1 | 3.7e-35 | 86 | 188 | 2 | 101 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsss 87 ++++ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+++tgt++ +a ++ + + s sa+ Pd.00g412120.m01 86 PTRRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEEAIIQATGTGTVPAIAVsvggtlkIPTTASTSADD--- 175 57999***********************************************************88888444433332211122222221... PP TCP 88 gkaaksaakskksq 101 ++++s++++k+++ Pd.00g412120.m01 176 -NSSPSSTTKKRKR 188 .2222222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence |
MTSYLEDQDD DGGTSDLSTS TGDPEDNNNN GNGVVSTQPN FDETTAFQQL KEEPIDSDPP 60 PQAHSIGMVP VAMQMPMSVA VPVSNPTRRA STKDRHTKVE GRGRRIRIPA TCAARIFQLT 120 RELGHKSDGE TVRWLLEHAE EAIIQATGTG TVPAIAVSVG GTLKIPTTAS TSADDNSSPS 180 STTKKRKRPS NFEFVDVKND AVTQSSGLAP VGPAAPQGLV PVWAVGGAGL MVPANAFWMG 240 PVGSGGGPSG PQPQIWALSP TVTPVFNVAG ATRPVSSFVA NNGGGVEVRA PSPALSNSAA 300 STSTVGPRAA KRSSTTMAPS VSSSSNNSNG SGSGASKAQM LRDFSLEIYD KQELQFMGRP 360 VGTPTTHQHQ TQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 3e-56 | TCP family protein |