PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g411230.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 224aa MW: 25544.7 Da PI: 8.3516

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g411230.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.6e-15	14	60	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W + Ed+ l+d +k +G g W+ +a++ g++R++k+c++rw++y Pd.00g411230.m02 14 RGAWCPKEDKVLADHIKTHGEGKWSHVAKKTGLNRSGKSCRLRWLNY 60 89********************************************9 PP
2	Myb_DNA-binding	52	1.6e-16	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ ++eE++l+++ +k+lG++ W++Iar+++ gRt++++k++w+ Pd.00g411230.m02 67 RGNISPEEEDLIIRMHKLLGNR-WSLIARRLP-GRTDNEIKNFWN 109 7999****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MGRKLSGDKE VVKRGAWCPK EDKVLADHIK THGEGKWSHV AKKTGLNRSG KSCRLRWLNY 60 IRPDVKRGNI SPEEEDLIIR MHKLLGNRWS LIARRLPGRT DNEIKNFWNI NLSKRVPEAR 120 PHRIKINAKN DGADEGGNCS AKDDQVQVIQ SITLNCTKAA AMIPSHHHLH DGDQRVNIQD 180 QRVVDDISSS SFLRDLDNFI NDVLHESEIN GDQNYVVDDQ EGEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	2e-54	MYB family protein