PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g411230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 194aa MW: 22203.9 Da PI: 6.8818 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 37 | 79 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ ++eE++l+++ +k+lG++ W++Iar+++ gRt++++k++w+ Pd.00g411230.m01 37 RGNISPEEEDLIIRMHKLLGNR-WSLIARRLP-GRTDNEIKNFWN 79 7999******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MEKENGATLL RKLVGLNRSG KSCRLRWLNY IRPDVKRGNI SPEEEDLIIR MHKLLGNRWS 60 LIARRLPGRT DNEIKNFWNI NLSKRVPEAR PHRIKINAKN DGADEGGNCS AKDDQVQVIQ 120 SITLNCTKAA AMIPSHHHLH DGDQRVNIQD QRVVDDISSS SFLRDLDNFI NDVLHESEIN 180 GDQNYVVDDQ EGEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 4e-39 | MYB family protein |