PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g405740.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 458aa MW: 50156.5 Da PI: 6.9582 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42 | 1.6e-13 | 70 | 116 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN +++Lr+l+Pk+ K++Ka+ L +++++k+L Pd.00g405740.m01 70 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVIDHVKDL 116 79*************************8.....7****************99 PP | |||||||
2 | Myb_DNA-binding | 56.5 | 6.3e-18 | 232 | 276 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W+++Ed l+++v+q+G+++W++I+ ++ gR++k+c++rw + Pd.00g405740.m01 232 GSWSPQEDSTLIKLVAQHGPRNWSLISTGIP-GRSGKSCRLRWCNQ 276 68*****************************.***********985 PP | |||||||
3 | Myb_DNA-binding | 57.2 | 3.9e-18 | 285 | 327 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T++Ed ++v+a++++G++ W+tIar ++ gRt++ +k++w++ Pd.00g405740.m01 285 SFTPQEDNIIVRAHALHGNK-WATIARLLP-GRTDNAIKNHWNST 327 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 458 aa Download sequence |
MENCYCAGPQ GATWAPYKSA ALSNESSSFP LPWPPHASSS TQFQFCGFPN SWSAAAEGAD 60 EEDRAATASK SHSQAEKRRR DRINAQLATL RKLIPKSDKM DKAALLGSVI DHVKDLKRKA 120 MEVSKAFMVP TEMDEITIDS DPAQAAANSS SNNINMNKSR CSIVIRASVC CDDRPELFSE 180 LIQVLKGLKL TAVRADMASV GGRIKSVLVL CKDGEEDEAL CISTLKQSLK LGSWSPQEDS 240 TLIKLVAQHG PRNWSLISTG IPGRSGKSCR LRWCNQLSPT VQHKSFTPQE DNIIVRAHAL 300 HGNKWATIAR LLPGRTDNAI KNHWNSTLRR RRQLAEFSST SSDSNSAAPI RYEAGMKRQC 360 LRVSPEPDSF KADVGGDGVV ETSLTLSPPG EKEENEVVLK SEDHDDEGKC AVETEETCLL 420 TIMQRMIAQE VRNYVDSLRA EDGPASFGLQ SAALQNDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 8e-50 | MYB family protein |