PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g395610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 452aa MW: 53131.6 Da PI: 9.1602 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.4 | 4.1e-22 | 11 | 94 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a+l++++ ++++w+v ++ leHnH l Pd.00g395610.m01 11 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMLRMRLVDSKRWRVLEVTLEHNHLL 94 69*****************************************9988.....99*********************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence |
MEFESYDDAY NYYNCYAKEV GFRVRVKNSW FKRNSREKYG AVLCCSSQGF KRIKDVNRLR 60 KETRTGCPAM LRMRLVDSKR WRVLEVTLEH NHLLGAKIYK SIKKVGSGMK RKSQSSSDAE 120 KRTIKLYRAL VIDSGADGTS NSNPTDIRNF PDHPNQKALI KAVYETLKVI EFEAAWGFMI 180 QRFGVGDHEW LRSLYEDRFR WAPVYLKETF FAGMSAARPG ETSSPFFDRY VHKQTPLKEF 240 LDKYELALQK KHKEEALADI ESRSSSPTLK TRCSFEFQLS KVYTREIFKK FQFEVEEMYS 300 CFSTTQLHID GPIIIFLVKE RVVVEGNRRE IRDYEVLYNR TAGEVRCICS CFNFYGYLCR 360 HALCVLNFNG VEEIPSKYIL SRWKKDFKRI YIPDHGSSNA DDTDRMQWFN QLYRSALQIV 420 EEGVISLDHY KVALQAFEQS LNRVHDIEDK HE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 1e-163 | FAR1 family protein |