PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g383980.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family TCP
Protein Properties Length: 173aa    MW: 19300.2 Da    PI: 10.1727
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g383980.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP78.22.3e-243683249
               TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktie 49
                      a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++ti+
  Pd.00g383980.m01 36 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTID 83
                      78*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MSNSEAPNNE LTNGGGGGGM VEQQASQRPS SNGVLAVKKP PSKDRHSKVD GRGRRIRMPI  60
ICAARVFQLT RELGHKSDGQ TIDNSRWARP QRPEWEITFQ DISICWLLCR AGTGILVGEK  120
TTRVEDQDYR PSVSGGWFVL VVVCFVGIYK YVFVACKKKK ACWMKLGQLC KQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08330.14e-29TCP family protein