PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g382670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 513aa MW: 55914.2 Da PI: 8.8475

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g382670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.1	3e-15	174	233	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g382670.m01 174 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 233 57*****************666664477446***********************98 PP
2	AP2	47.2	5.3e-15	276	327	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g382670.m01 276 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 327 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MDSSPQNWLL GFSLSNHSHH RHPSHDLSLF EAFASSPSHT SAHQQQDHSN PGGATPPSPT 60 DLSIFSSGVG GPKLEDFLGG STATPTSLAH FSGTTAAADH HHNHQQTAPL ALSESEIYDS 120 ELKTIAASFL RGFSTPATAS ATSVQTTKPQ NLVPLASSEL TPKKTADTFG QRTSIYRGVT 180 RHRWTGRYEA HLWDNSCRRE GQSRKGRQVY LGGYDKEEKA ARAYDLAALK YWGPTTTTNF 240 PVSHYQKELN EMKNMTRQEF VASLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN 300 KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDMTRYD VKSIANSNLP IGGMSGKSKN 360 SSDSDSKSIE GNRSADDRDL SSASSVTFAS QQPSSSTLSF AIPIKQDPST DYWSNIFGYH 420 HNAKNPSTVS VAPSSLFQSC TTNVPYGNNS SQIPFNMDFS VSATSSTSPP ETNNGNNGFE 480 TTSGYGSWIG PSLHTFQTHA KTNLFQTPIF GME

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MDSSPQNWLL GFSLSNHSHH RHPSHDLSLF EAFASSPSHT SAHQQQDHSN PGGATPPSPT  60
DLSIFSSGVG GPKLEDFLGG STATPTSLAH FSGTTAAADH HHNHQQTAPL ALSESEIYDS  120
ELKTIAASFL RGFSTPATAS ATSVQTTKPQ NLVPLASSEL TPKKTADTFG QRTSIYRGVT  180
RHRWTGRYEA HLWDNSCRRE GQSRKGRQVY LGGYDKEEKA ARAYDLAALK YWGPTTTTNF  240
PVSHYQKELN EMKNMTRQEF VASLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN  300
KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDMTRYD VKSIANSNLP IGGMSGKSKN  360
SSDSDSKSIE GNRSADDRDL SSASSVTFAS QQPSSSTLSF AIPIKQDPST DYWSNIFGYH  420
HNAKNPSTVS VAPSSLFQSC TTNVPYGNNS SQIPFNMDFS VSATSSTSPP ETNNGNNGFE  480
TTSGYGSWIG PSLHTFQTHA KTNLFQTPIF GME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-150	AP2 family protein