PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g377030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 361aa    MW: 40556 Da    PI: 5.4782
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g377030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS333.83.1e-102236025374
              GRAS  25 arlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDf 117
                       + l+el sp+gd+ q+l++yf++AL +r+++s++++y++l + ++++ + +++ +++  f+evsP+ +f+h+++N aI+ea++ge ++HiiD+
  Pd.00g377030.m01   2 WMLNELGSPYGDTDQKLTSYFLQALFSRMTDSGDRCYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEAFDGEPKLHIIDI 94 
                       789************************************96655554444444444455********************************** PP

              GRAS 118 disqGlQWpaLlqaLasRpegppslRiTgvgspesg.......skeeleetgerLakfAeelgvpfefnvlvak.rledleleeLrvkpgEal 202
                       + ++++QWp+Ll+aLa+R++++p+lR+T+v++ +++        ++ ++e+g r++kfA+ +gvpf+fn+++++ +l++l+l+eL+++ +Eal
  Pd.00g377030.m01  95 SNTYCTQWPTLLEALATRTDETPHLRLTTVVATRASdgsggapAQKVIKEIGARMEKFARLMGVPFKFNAVHHSgDLSELNLSELDIRDDEAL 187
                       ******************************9987778999**9999*************************8888****************** PP

              GRAS 203 aVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvErellg 291
                       aVn+v  lh++     ++ ++rd ++++++sl+P+++++ve+ead++ +    +F+++f e+l+++ + f++l+++++r+s+er ++Er+  g
  Pd.00g377030.m01 188 AVNCVGTLHSIQ----AVGNRRDYLVSAFRSLRPRIITLVEEEADLDVGvdgiEFVHGFQECLRWFRVYFEALDESFARTSNERLMLERA-AG 275
                       ***********8....8888899********************9986555666*************************************.** PP

              GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaWr 374
                       r++v++vac+ +e++er+et+++W++r++ aGF+pv++s+++ +++++llr++k +g+ +    e  + ++l Wkd+p+v++SaWr
  Pd.00g377030.m01 276 RAVVDLVACAPSESVERRETAARWSRRMHGAGFSPVTFSDEVCDDVRALLRRYK-EGWAMTqclEAGAGIFLSWKDQPVVWASAWR 360
                       ******************************************************.6665554556777888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MWMLNELGSP YGDTDQKLTS YFLQALFSRM TDSGDRCYRT LISASEKTCS FESTRKMVLK  60
FQEVSPWTTF GHVACNGAIM EAFDGEPKLH IIDISNTYCT QWPTLLEALA TRTDETPHLR  120
LTTVVATRAS DGSGGAPAQK VIKEIGARME KFARLMGVPF KFNAVHHSGD LSELNLSELD  180
IRDDEALAVN CVGTLHSIQA VGNRRDYLVS AFRSLRPRII TLVEEEADLD VGVDGIEFVH  240
GFQECLRWFR VYFEALDESF ARTSNERLML ERAAGRAVVD LVACAPSESV ERRETAARWS  300
RRMHGAGFSP VTFSDEVCDD VRALLRRYKE GWAMTQCLEA GAGIFLSWKD QPVVWASAWR  360
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein