PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g374380.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 222aa MW: 25618 Da PI: 9.682

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g374380.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.5	4.2e-20	28	75	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ +G ++WktIa++ g++R++k+c++rw++yl Pd.00g374380.m01 28 KGAWTAEEDHKLAEVIEVHGAKRWKTIASKAGLNRCGKSCRLRWLNYL 75 79********************************************97 PP
2	Myb_DNA-binding	50.5	4.6e-16	81	126	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l Pd.00g374380.m01 81 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 126 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MAPMTEASIK RKAKAGEAMK SSKREVNKGA WTAEEDHKLA EVIEVHGAKR WKTIASKAGL 60 NRCGKSCRLR WLNYLRPNIK RGNISDQEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN 120 YWNSHLSKRI IQKEKQIGAN PTRQMVSTDQ KLSLAEHHQK VHIEMKEDSS SEEGANFAFK 180 DSNKNMNNID VDDFFDFSNE GPLNLEWVSK FLDFDDDRWL IN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	1e-54	MYB family protein