PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g371090.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 449aa MW: 50353.7 Da PI: 7.3582 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.3 | 1.2e-12 | 303 | 348 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YI++L Pd.00g371090.m01 303 NHVEAERQRREKLNHRFYALRSVVPNV-----SKMDKASLLSDAVVYINKL 348 799***********************6.....5***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence |
MEEIMSSCSP NFGQENSATL QQRLQFIVQN RPEWWVYSIF WQASKDSNGQ VALSWAGGHF 60 RSSRDLASKR SNRLVHNYQP KSGFISSERK KVVNREVEAL FHEDMDLDGG DVTDSEWFYF 120 YTVSLTQSFG ACHGTGNILG RAFCSGGFVW LAGDHELQFY ECERVKEARM HGIQTLVCIQ 180 TSCGVLELAS LDVIKEDWGL VEVSKSLFGS ENSRVSKPQS SREGHVLVPL LESGMFSAGP 240 QKEWTAQGGT KERFALNIGG SSSDSGPSDS VGNFTTENAE NNGRLKKRGR SSNHGTDKES 300 PINHVEAERQ RREKLNHRFY ALRSVVPNVS KMDKASLLSD AVVYINKLKA RVEELEAKIQ 360 QPQKPKLAGA IEVDVKIVGS EAMIRVQSPD QNYPYARLMN ALKDLELQVY HASISSVKEM 420 MLQDVVARVP HGFTSEEAMR TAIIKRWYN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 285 | 291 | LKKRGRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 8e-64 | bHLH family protein |