PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g370120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 478aa    MW: 53213.8 Da    PI: 7.5251
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g370120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-1859108255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp   + + +r++lg+f tae Aa a++aa+++++g
  Pd.00g370120.m01  59 HYRGVRQRP-WGKFAAEIRDP---N-KaARVWLGTFETAEAAALAYDAAALRFKG 108
                       7********.**********9...3.35***********************9987 PP
2AP258.41.8e-18289338255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr++k +g+W+AeIrdp    +r  r +lg+++tae Aa a+++a+++++g
  Pd.00g370120.m01 289 HYRGVRQRK-WGKWAAEIRDP----IRaVRLWLGTYDTAEAAALAYDKAALSFKG 338
                       69******9.**********7....358**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MSAMVSALAQ VIGTTDQTPV VQVPSEPLVN PLPSAMELHD DQPPQLQAAQ NQGNVRRRHY  60
RGVRQRPWGK FAAEIRDPNK AARVWLGTFE TAEAAALAYD AAALRFKGSK AKLNFPERVQ  120
GGTELGYLTT TGPQDLAAGG SRRTELAHHN QPLSDHQYQP QANPNNVNFT QPDQYAQYFR  180
GGLLDLDRSI SVVLPCQFHK VDRKHGKRPL PSDDESEAKE EDQIFPVYSS RSQQDTSVMI  240
SALAQVIGNT DQTPPQQVQG NPLITSQSSP AESQSQPELQ DQGNVRRQHY RGVRQRKWGK  300
WAAEIRDPIR AVRLWLGTYD TAEAAALAYD KAALSFKGSK AKLNFPERVQ ESSEFGNLTI  360
TTQQQHNLNN PENVERVQVT DHVVPNPPHQ PISQPTYSNM FSYAPYAQGG TNNVDDNVHQ  420
VLPSHENYGP QILPTTSSTS SSMPSQQEEL RRMQFGSSRS SSDLSNKYRK DFEGSHSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.18e-35ERF family protein