PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g364520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 614aa MW: 70017.9 Da PI: 6.9491

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g364520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.5	3.6e-09	557	601	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ Pd.00g364520.m01 557 VWSAVQERALVQALKTFPKEasqRWERVAAAVP-GKTVNQCKKKFT 601 6******************************.*******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MNVQSKFRLI SYSQELVDGQ PVYVTSNCLP VKALKLEPAG HSFHAVALKL LGCVEEEKDA 60 DVQKVVNDKE PTSIPSFDSY SSKGKKKSGA EGKQQDHYAL LGLSHLRYLA TEEQIRKSYR 120 ETALKYHPDK QAALLLNEET EAAKQTKKDE IESHFKSIQE AYEALIDPVK RRIYDSTDEF 180 DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPIPFLGDEN TPLKEVDSFY DFWYTFKSWR 240 EFPHTDEFDL EQAESRDHKR WMERQNAKLS EKARKEEYAR IRTLEEEAAR AVEEEKRRKE 300 EEEKRAAEIA LQQKKLKEKE KKLLRKERSR LRTLSGPVIS NRLLSLAEDD VESLCMSLDI 360 EQLRNICERM EGKEGLERAE VLRDACGYKN DLEGKKEDEK KTLQQNGSVG TNGTVLLGSY 420 EKKEKPWSRE EIELLRKGML KFPKGTSRRW EVVSDYIGTG RSVEEILKAT KTVLLQKPDS 480 SKAFDSFLEK RKPTPSIASP LTTRIEVEGV LTPPQGTETP AEKVDKSGES SSGSTKDQNP 540 NDPIAENGVS SGSEQDVWSA VQERALVQAL KTFPKEASQR WERVAAAVPG KTVNQCKKKF 600 TLLKESFRNK KSSA

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MNVQSKFRLI SYSQELVDGQ PVYVTSNCLP VKALKLEPAG HSFHAVALKL LGCVEEEKDA  60
DVQKVVNDKE PTSIPSFDSY SSKGKKKSGA EGKQQDHYAL LGLSHLRYLA TEEQIRKSYR  120
ETALKYHPDK QAALLLNEET EAAKQTKKDE IESHFKSIQE AYEALIDPVK RRIYDSTDEF  180
DDEIPTDCAP QDFFKVFGPA FMRNGRWSVN QPIPFLGDEN TPLKEVDSFY DFWYTFKSWR  240
EFPHTDEFDL EQAESRDHKR WMERQNAKLS EKARKEEYAR IRTLEEEAAR AVEEEKRRKE  300
EEEKRAAEIA LQQKKLKEKE KKLLRKERSR LRTLSGPVIS NRLLSLAEDD VESLCMSLDI  360
EQLRNICERM EGKEGLERAE VLRDACGYKN DLEGKKEDEK KTLQQNGSVG TNGTVLLGSY  420
EKKEKPWSRE EIELLRKGML KFPKGTSRRW EVVSDYIGTG RSVEEILKAT KTVLLQKPDS  480
SKAFDSFLEK RKPTPSIASP LTTRIEVEGV LTPPQGTETP AEKVDKSGES SSGSTKDQNP  540
NDPIAENGVS SGSEQDVWSA VQERALVQAL KTFPKEASQR WERVAAAVPG KTVNQCKKKF  600
TLLKESFRNK KSSA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	319	KRRKEEEEKRAAEIALQQKKLKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	1e-123	MYB family protein