PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g362010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 244aa MW: 27824.8 Da PI: 9.793 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 52.8 | 1e-16 | 22 | 112 | 2 | 79 |
trihelix 2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstc 79 Wt e++ Liea++ ++er +++ ++ +W++v ++++++g+ rs++qC++kw+nl ++ykk++e e+++ ++e+ s + Pd.00g362010.m01 22 WTVGETMILIEAKKMDDERRMKRSgdaagsetrsskPAELRWKWVEDYCWKKGCLRSQNQCNDKWDNLMRDYKKVREYERREgREEAASYW 112 *************96655555432234444445444999****************************************996344444444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MADQGGNGTS SVIMRDYRKG NWTVGETMIL IEAKKMDDER RMKRSGDAAG SETRSSKPAE 60 LRWKWVEDYC WKKGCLRSQN QCNDKWDNLM RDYKKVREYE RREGREEAAS YWKLEKSERK 120 DRNLPTNMVP QIYEALVDVV EKREAGHHQI RVVGGASVSG SNVPNPTIGY VVERPIISTS 180 VHQASLPPPV LQHHISVPPI AALPLLPPAP LAVQPPPTLP YSQPMPTKHF RVVRREKREG 240 TEIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 5e-55 | Trihelix family protein |