PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g354780.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 206aa MW: 23302.5 Da PI: 9.2649 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.4 | 9.2e-10 | 13 | 41 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+W+++Ed++l+d+++++G g+W++ ++ Pd.00g354780.m01 13 KGAWSKQEDQKLIDYIQKHGEGCWNSLPK 41 79***********************9876 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.8e-16 | 47 | 91 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ Pd.00g354780.m01 47 RGSFGEDEEDLIIRLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 91 899*******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MRKPCCEKTE ITKGAWSKQE DQKLIDYIQK HGEGCWNSLP KAADLKRGSF GEDEEDLIIR 60 LHALLGNRWS LIAGRLPGRT DNEVKNYWNS HIRKKLVKMG TTTSSSTALD QKKPHHRDNK 120 VPLLMQPDAR NPILFRPPAT TTDQKRAPNR NDEVDVSDSM SINGGNQLQT GVIMSNKSFC 180 LPDLNLDLTL SLQLAVGERQ QSDIWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 1e-50 | MYB family protein |