PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g353790.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 454aa MW: 49931.7 Da PI: 7.3829 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.8 | 1.8e-16 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+ ++++a k++G g W+ I +++g ++t+ q++s+ qk+ Pd.00g353790.m01 59 REKWTEEEHHKFLEALKLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 103 789*******************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MAVEDYSEAT GSNASVAAAD CSLKGDAQSK PVIELKEISS FGNDHTPKIR KPYTITKQRE 60 KWTEEEHHKF LEALKLYGRG WRQIEEHVGT KTAVQIRSHA QKFFSKVSKE SSGPSEGSIT 120 PIEIPPPRPK RKPVHPYPRK SVDSLIGSPE RSPSPHFSVS GKGQESPTSV LSALGSDVLG 180 SAALDQPSRS ATPTSCTTDM RSTIFSHVEK ENDYMTSNSS PEEVKESVPS VQLSADSTPE 240 KFVCMKHGSG SNHIVSTEGD AGSPRASPSI KLFGRTVLVS DLDRQSPPGS FTKDSKAKQE 300 NLQRENDKLA QTLRLDELDT RLSLGGIVEH RRQSPNSQEV SPDAPPPWWF MHNGLIPFFQ 360 VRSCNQNSVQ IQANSCADET MKEMETSLSH DGSVSAVEIL AEKHLEAADA LREETRSLPC 420 SSRKGFAPYK RCLADRNMNS SGEMRDRQRA RVCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18330.1 | 2e-51 | MYB_related family protein |