PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g352350.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 193aa MW: 22166.6 Da PI: 4.9849 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 102.4 | 4e-32 | 2 | 86 | 9 | 102 |
HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101 ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++ weF +++F+kg+k++l++i+r+k Pd.00g352350.m01 2 LVEDPATDDVISWNDDGSAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVSTSR---------WEFCNDKFRKGEKDQLCDIRRRK 85 799*******************************************************999.........*********************98 PP X CS HSF_DNA-bind 102 s 102 Pd.00g352350.m01 86 A 86 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MLVEDPATDD VISWNDDGSA FVVWQPAEFA RDLLPTLFKH SNFSSFVRQL NTYGFRKVST 60 SRWEFCNDKF RKGEKDQLCD IRRRKAWASK QQPINNIALN QAAQAMPNQD EFDEDQRSNS 120 STSSSSDYSS LVDENKRLKQ ENGVLSSELT SMKRKCKELL DLVVKYGDSA EKEEEENNSP 180 LVAIPKKDTH LNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41690.1 | 1e-56 | HSF family protein |