PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g348110.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 597aa MW: 66403.7 Da PI: 9.6481 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.4 | 1.7e-13 | 349 | 401 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++ AeIrdp + r r+++g + t eeAa a+++a ++++g Pd.00g348110.m01 349 RYRGVRQRR-SGKFTAEIRDPA--KkvSRNRVWVGCYETSEEAALAYDRASLRIHG 401 7*****999.7*********84..34335************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 597 aa Download sequence |
MNTTVQPQTQ HPSSHAVTGN HLYPQPHLHL PVQSGAPQQR TMDMQSHGVP HSQSQTPVQI 60 QSQSPQQPPV MRLPQSHIPN HHQPALLPSP GQIRNINPAQ QQPVHSYAQQ PGNTVQQRPL 120 MRAVQRSIPR QYLRHQPYVQ QQPPTQLHPR GQSHSFPLHV HAYTQSQRNI ALSQGIQLSQ 180 SNLGGSRRPM MPIHGVQSQT SVQTAGGLHM RPVHPTVHLP STNQSNMVRT KNLVQSGANW 240 RPTTSERHAE QESESSAEQI AKNVTHDVGT ASAVVGDAEV KTVKSEMDMK SIDNENKPTG 300 EDKTNHGDTS SKEIPDIHAL ENGESVSQSM LNAADQNKVQ KLGVARGRRY RGVRQRRSGK 360 FTAEIRDPAK KVSRNRVWVG CYETSEEAAL AYDRASLRIH GSKAVLNFPI CHIRDCLERA 420 STCPNHRQAQ RTGERGCHSF NNAEIHCTLL IAADPLFPRT GKTDLYESPF LSKLGVVDPK 480 ATEERTFNVV NLLMCSLVPK TPFTDMLLKP KPEAQLINEF CDQRISIISQ VAEYTMRGDP 540 NISFTLTIGD RSSWKGCIDN LYKSVEDIDG QHLMSTSHRT ILLSPKPAPG FSYANHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 3e-16 | ERF family protein |