PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g346730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 200aa    MW: 21865 Da    PI: 4.669
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g346730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.23.8e-102762337
                      --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl 37
                      +R+++tkeq++ Le+++++  r+psae++++L++ +
  Pd.00g346730.m01 27 SRWNPTKEQINMLENFYRQgIRTPSAEQIQQLTMMC 62
                      7*****************99*************987 PP
2Wus_type_Homeobox48.42.2e-162665342
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeey 42
                       ++RW+Pt+eQi++Le+ y++G+rtP++e+iq++t++ + y
   Pd.00g346730.m01 26 TSRWNPTKEQINMLENFYRQGIRTPSAEQIQQLTMMCSPY 65
                       79********************************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MDGYDEQHVQ GDSARAAGDG AAPGSTSRWN PTKEQINMLE NFYRQGIRTP SAEQIQQLTM  60
MCSPYYIPVQ NELGFDQQSP YPNKVPFPGG AKRKPRTEKS VKPRTTRTGG SGYEPMPYGY  120
SSSGDGYMIK DVTNESTGRC DQETLPLFPL QPTGILQGRE YQNPSCGSGT ANYADNSTAA  180
LIGSNSEIVG DQPFYDFFSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.17e-13WOX family protein