PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g345570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 319aa    MW: 35387.9 Da    PI: 6.8785
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g345570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof129.41e-4044105263
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                       +e+alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGG+lrnvPvGgg+rknk+sss
  Pd.00g345570.m01  44 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGTLRNVPVGGGCRKNKRSSS 105
                       7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MNYMDPSSGQ QHQEMSAHSL DMLVCSETQQ QQQQQQDRKP RPQPEQALKC PRCDSTNTKF  60
CYYNNYSLSQ PRYFCKACRR YWTKGGTLRN VPVGGGCRKN KRSSSSSKRS QDQQPLTPNS  120
NNPLPSLGYD SNDLTLAFAR LQRQSCGQLS FDDQDHLSIL GNPNNTTSHG DHSILGNHGL  180
NMNTTSAAAA PGFLDALRTG FLETHNGNFQ NMYYGFGNGS NSSSLGEVEN GVCGEMGLHT  240
FEEMTNSTTT AVTVTTMKQE LCNARDHQSE SNRVLWGFPW QLNGDANNNM VSNECDSGRV  300
ESWNGLAPSW HGLLHSPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.11e-41Dof family protein