PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g344600.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 313aa    MW: 34868.9 Da    PI: 7.3143
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g344600.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.25.6e-19235268134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  Pd.00g344600.m02 235 CMHCAVTKTPQWREGPLGPKTLCNACGVRYRSGR 268
                       99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MTAVSADVTK LTKREGFSEN ISAMASSMPT DDNFNIESFL PDELKALDFP MEDIEECVED  60
EDWYAEFQNL EPPSFEDLFC PRVLDGNDDV KPKNLSTSYG QTSQRNQLPK TAAKTTRGIS  120
SIRSEDLESI GSCAAQFEPK FEKRTRSKLS RSKRSSPAIF NTQFFPSTSS NSSASENLYH  180
WDASESDLEG SLTEEMSNAA KRKQKKKRNL SQLSSAAMRK LSQEEPGESR ETKRCMHCAV  240
TKTPQWREGP LGPKTLCNAC GVRYRSGRLF PEYRPAASPT FVASVHSNSH KKVIELRNKG  300
CQGATMGILS SAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.22e-38GATA family protein