PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g341440.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 662aa MW: 75015.5 Da PI: 6.7689

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g341440.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.8	1.1e-20	53	146	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel Pd.00g341440.m01 53 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSEDGKMQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNHEL 145 6*************9998874556679***************9***************98887676789***********9 PP FAR1 90 a 90 Pd.00g341440.m01 146 L 146 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK 60 QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR 120 IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSI STDDKSRICM FAKAGMSVRQ 180 MLRLMELEKG VKLGCLPFTE IDVRNLLQSF RNVDGDNDAI DLIAMCKKMK DENPNFKYEF 240 KIDGHNRLEH IAWSYASSVQ LYEAFGDTTV FDTTHRLDAY DMLLGIWLGV DNHGMTCFFG 300 CVLLQDENIQ SFSWALKTFL GFMKGKAPQT MLTDHNMWLK EAIAVDMPQS KHAFCIWHIV 360 AKKMEGNEMM STSQAESINA FIQRFLSAQS QLDRFVEQVA DIVDYNDRVG AKQKMQRKMQ 420 RVCLKTGSPI ESHAASVLTP YAFGKLQEEL VLAPQYASLL VDEGCFQVRH HTEEDGGCKV 480 VWIPCQGHIS CSCYQFEFSG ILCRHVLRVL STNNCFHIPD QYLPTRWCGV SSSSTNTFET 540 ATMKDNSEKI HLLESLASTL VTESVETEDR LDAACEQIAM ALSRVKDLPR TTHNAIDIAY 600 NCPSESLILQ DVEEADGIIR FTVGNSHESV TLGKLKERRP RDIVEISRKR RHCSGPCCLS 660 VQ

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MSEGTSLGME DLSQDDIGTI EETAEDTILS RQTSVNLVPF VGQRFVSQEA AYEFYCSFAK  60
QCGFSIRRHR TRGKDGVGRG VTRRDFTCHR GGYPQMKPSE DGKMQRNRKS SRCGCQAYMR  120
IVKRADFDVP EWRVTGFSNI HNHELLKSNE VRLLPAYCSI STDDKSRICM FAKAGMSVRQ  180
MLRLMELEKG VKLGCLPFTE IDVRNLLQSF RNVDGDNDAI DLIAMCKKMK DENPNFKYEF  240
KIDGHNRLEH IAWSYASSVQ LYEAFGDTTV FDTTHRLDAY DMLLGIWLGV DNHGMTCFFG  300
CVLLQDENIQ SFSWALKTFL GFMKGKAPQT MLTDHNMWLK EAIAVDMPQS KHAFCIWHIV  360
AKKMEGNEMM STSQAESINA FIQRFLSAQS QLDRFVEQVA DIVDYNDRVG AKQKMQRKMQ  420
RVCLKTGSPI ESHAASVLTP YAFGKLQEEL VLAPQYASLL VDEGCFQVRH HTEEDGGCKV  480
VWIPCQGHIS CSCYQFEFSG ILCRHVLRVL STNNCFHIPD QYLPTRWCGV SSSSTNTFET  540
ATMKDNSEKI HLLESLASTL VTESVETEDR LDAACEQIAM ALSRVKDLPR TTHNAIDIAY  600
NCPSESLILQ DVEEADGIIR FTVGNSHESV TLGKLKERRP RDIVEISRKR RHCSGPCCLS  660
VQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-165	FAR1 family protein