PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g341400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 377aa MW: 41751.5 Da PI: 5.2235

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g341400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l ++++++G g+W++ ++ g+ R++k+c++rw +yl Pd.00g341400.m01 14 RGRWTAEEDEILTNYIQLHGEGSWRSLPNNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	53.7	4.9e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e +v++++ +G++ W+ Ia++++ gRt++++k++w+++l Pd.00g341400.m01 67 RGNITAEEEETIVKLHTAMGNR-WSFIAAHLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MGRAPCCEKL GLKRGRWTAE EDEILTNYIQ LHGEGSWRSL PNNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TAEEEETIVK LHTAMGNRWS FIAAHLPGRT DNEIKNYWNS HLSRKIYTFT 120 NLGKNYLPTI MNVGKKTAAS FKDRRAAARA NRSSIMNKNK NVLSPSPQRS QAKPQQSGTN 180 IADHVVLQLE PSARENQKGD EAIRMLGLKG SCLDSTERIN LDHCGDQKEG AELCLGNKVN 240 ITSSTVLSGD NNGEKEVLGL CECVESEIMG LESGVVDPSG NIGFKEQRED GIIMEGNITD 300 EVTKSEGRES TSLWSSNAES GSGELYSFSS SLNSAFDDEW LSWGWAGGFE CHNELELWDE 360 GESIAWLWES GSTGEGH

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MGRAPCCEKL GLKRGRWTAE EDEILTNYIQ LHGEGSWRSL PNNAGLLRCG KSCRLRWINY  60
LRADLKRGNI TAEEEETIVK LHTAMGNRWS FIAAHLPGRT DNEIKNYWNS HLSRKIYTFT  120
NLGKNYLPTI MNVGKKTAAS FKDRRAAARA NRSSIMNKNK NVLSPSPQRS QAKPQQSGTN  180
IADHVVLQLE PSARENQKGD EAIRMLGLKG SCLDSTERIN LDHCGDQKEG AELCLGNKVN  240
ITSSTVLSGD NNGEKEVLGL CECVESEIMG LESGVVDPSG NIGFKEQRED GIIMEGNITD  300
EVTKSEGRES TSLWSSNAES GSGELYSFSS SLNSAFDDEW LSWGWAGGFE CHNELELWDE  360
GESIAWLWES GSTGEGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	2e-74	MYB family protein