PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g339810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 320aa    MW: 36616.8 Da    PI: 4.3627
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g339810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM576.9e-1871432128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 
                       p GfrF+P+dee+v  +L + + ++k  ++l +  ++ +++  +++eP+++ kk+      ++++yf sk +k ++ ++  +r+ + g+W++t
  Pd.00g339810.m01   7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfFHACNLfgNNTEPSEIWKKYGRpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSET 98 
                       89******************97776658555444489999733589*****7543332225567788777766555.4566668999****** PP

               NAM  87 gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++k v++k     + + +g k+ + + ++  ++  +t W+++ey+l
  Pd.00g339810.m01  99 ESSKLVHEKvsgnpNPNPIGRKRKFRYENK--SSEDHTGWLLDEYSL 143
                       ******999877666667********9844..44469********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEVSLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK  60
YGRPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK  120
RKFRYENKSS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKR  180
CSSSPIGGDL VGFDPIDLTI FEENTMVDME QLLGEDWSPS NFENEENKMA SMEQLLGEAW  240
SPSNFEDAVS YDVDPIGATQ INFENEENTM ANMEQLLGEA WSPSNFENVI SHDVDPIGET  300
QSSQLSNWSQ AIIDQLLVGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.14e-10NAC family protein