PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g338700.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GeBP | ||||||||
Protein Properties | Length: 88aa MW: 10261.9 Da PI: 10.0857 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 44.8 | 3.5e-14 | 3 | 57 | 36 | 93 |
DUF573 36 afyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 +fy+f+k+ ++++v+k+ql +Ki +LKkK++++++k gk+ + k+h+ +f+ls+ Pd.00g338700.m01 3 DFYDFIKNLLKADVNKTQLQDKICKLKKKYETNMAK---GKKYNTVKPHELTVFDLSR 57 7***********************************...9999*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MVDFYDFIKN LLKADVNKTQ LQDKICKLKK KYETNMAKGK KYNTVKPHEL TVFDLSRYGA 60 AAKGLRSVWV GESWGCWRVT WSLLENQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 3e-09 | GeBP family protein |