PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g335480.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 283aa    MW: 32366.8 Da    PI: 4.8599
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g335480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.41.9e-10137170233
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST..T-- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCp 33 
                       dDg+ WrKYGqK + +s+++r Y   +    +C+
  Pd.00g335480.m01 137 DDGHGWRKYGQKRILNSKHSRDYLNASELllDCT 170
                       8**********************98887666776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MTSHDNNVNR RARVEALRHM LYDVEAHLAV GLIMECSWPE SVLSNGERVK EELMQGRELA  60
ESDRELVSSD QIQGISSGGG SADSSSWDAN HTAAVIKSED FYEESCKSTS TFKDRRGSYK  120
RRKTSHSWTR DTPALTDDGH GWRKYGQKRI LNSKHSRDYL NASELLLDCT SPRESSNFIR  180
FGDTKQDHPF FSFFTSVKRE ELVFKEESII KEEIPPTSDD RVITSHDNPL WLCDYLVSPD  240
LTMFESSGPP SRFSSTLDEF DHEDVISRLM MGSFDLDEVL QYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-08WRKY family protein