PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g325430.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GATA | ||||||||
Protein Properties | Length: 256aa MW: 27980.3 Da PI: 4.777 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.2 | 1.1e-18 | 175 | 208 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C++ kTp+WR gp g ktLCnaCG+++++ + Pd.00g325430.m01 175 CSHCHVQKTPQWRTGPLGAKTLCNACGVRFKSGR 208 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MELCMEAKAL KSSLRRELAL KSNQQALIDE FWCATGISGV PSEDFSVDDL LDLSNGEFED 60 GSVEEEEEEK DSVSVDDESS NSSNFVSADS ESALASQLLV PDDDLAGLEW VSHFVDDSLL 120 DLSLLHPVGT QKPEALALTR TDVFVGEPAT KKQKKKPAVQ TGVDGSVGVQ FQRRCSHCHV 180 QKTPQWRTGP LGAKTLCNAC GVRFKSGRLF PEYRPACSPT FSGDVHSNSH RKVLEMRKRK 240 EAGGPEPGLN RVIPSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36240.1 | 4e-44 | GATA family protein |