PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g324280.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 519aa MW: 56763.4 Da PI: 4.9776

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g324280.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.5	1.6e-18	210	260	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r r +lg+f ta +Aa a+++a+k+++g Pd.00g324280.m01 210 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALDAALAYDEAAKAMYG 260 56***999.******8...3.35**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MKCSSNVTTT TAVAVAATPR RLSTPPGPKG DWNWNRLIFG LGFRRAVKVV VEDSSRIKWE 60 EKRRDKTRKY FGSKKATSYS LDSRSVVSTG KGQGYDINLR SFSQPDLSSQ AILSSEIVEK 120 TINQSLSKLQ GMGAYDQGSN GVALTLDSTR KRKTRSRRDG TSVAETLEKW KEYNKQLESD 180 TNEGKTRKVP AKGSKKGCMK GKGGPDNSRC NYRGVRQRTW GKWVAEIREP NRGSRLWLGT 240 FPTALDAALA YDEAAKAMYG PAARLNLPNV ANYSSWKESS QETSSATTPS GSSAVATPGC 300 SGSTSSSNHS EVCADEDSKG FLDVKTENGE GESAIHAWSN AVNQALVKEE TKDEFTEGYF 360 HNDQPAVKPE AYVGDFNWAG GPYPGDYLEN FTEEEVFDVD ELLTPLDDTP VRNPEPEQGL 420 GSDVGQPGCS GMHPYECDRP SNLSYQLQFP DAKLLGSLNH MEQGPSGGEY NFDFLKGDDV 480 TGEDDQGYYN LGLSDLGLGD FTGGTMQPED GSYNFSMDM

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MKCSSNVTTT TAVAVAATPR RLSTPPGPKG DWNWNRLIFG LGFRRAVKVV VEDSSRIKWE  60
EKRRDKTRKY FGSKKATSYS LDSRSVVSTG KGQGYDINLR SFSQPDLSSQ AILSSEIVEK  120
TINQSLSKLQ GMGAYDQGSN GVALTLDSTR KRKTRSRRDG TSVAETLEKW KEYNKQLESD  180
TNEGKTRKVP AKGSKKGCMK GKGGPDNSRC NYRGVRQRTW GKWVAEIREP NRGSRLWLGT  240
FPTALDAALA YDEAAKAMYG PAARLNLPNV ANYSSWKESS QETSSATTPS GSSAVATPGC  300
SGSTSSSNHS EVCADEDSKG FLDVKTENGE GESAIHAWSN AVNQALVKEE TKDEFTEGYF  360
HNDQPAVKPE AYVGDFNWAG GPYPGDYLEN FTEEEVFDVD ELLTPLDDTP VRNPEPEQGL  420
GSDVGQPGCS GMHPYECDRP SNLSYQLQFP DAKLLGSLNH MEQGPSGGEY NFDFLKGDDV  480
TGEDDQGYYN LGLSDLGLGD FTGGTMQPED GSYNFSMDM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	154	TRKRKT
2	152	159	RKTRSRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	3e-41	ERF family protein