PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g323610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 532aa    MW: 59757.6 Da    PI: 4.586
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g323610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS364.91.1e-1111545251374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsevsPi 90 
                       lv+ Ll+cAeav  +d++la++lL+++   +sp gd++qR+ ++f+ +L++rl+  +  ++  +++  + + +    +e+l a++l+++++P+
  Pd.00g323610.m01 154 LVHMLLACAEAVGCRDTKLAESLLSQIWASVSPWGDSLQRVSSCFAMGLRSRLSLlHNVNINGTFNNDTMDVSLtsREEKLEAFQLLNQTTPY 246
                       689**************************************************9956666777776666554446689999************ PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                       + f++++aN+aI +a++g+e +HiiD+++++ lQWp+L+++LasRpegpp +lRiTg+++   ++  ele+  + L + A++lg+p efn++ 
  Pd.00g323610.m01 247 IAFGFMVANEAICQAAQGKENLHIIDLGMEHTLQWPSLIRTLASRPEGPPkKLRITGLVE--DHNVFELEAGMKALVEEASSLGIPTEFNMIS 337
                       **********************************************988889********..569**************************74 PP

              GRAS 183 ak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                       +  + + l+ e+L++++gEal Vn++++lh+ ++es  + +   ++L+++k+l P+v+++veq+a+hn++ Fl rfle+l++ysa+fdslea+
  Pd.00g323610.m01 338 EPvKPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLK---AILQALKKLGPTVLTLVEQDANHNGPFFLGRFLESLHFYSAIFDSLEAS 427
                       4358999**************************88776666...9************************************************ PP

              GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpL 367
                       lpr+s +r+k+Er+ ++ ei+n+va eg +r+erhe++ +Wr++l++aGF+ + l+   ++qa+++l+ ++ dgy++ +e+g+l+lgWk+rp+
  Pd.00g323610.m01 428 LPRNSPQRMKIERQHFADEIRNIVAFEGLNRIERHERADQWRRQLGRAGFQVMGLK--CTSQARMMLSVYGCDGYTLASEKGCLLLGWKGRPI 518
                       ****************************************************9996..679******************************** PP

              GRAS 368 vsvSaWr 374
                       + +SaW+
  Pd.00g323610.m01 519 MLASAWQ 525
                       ******6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    
MEDFNGWLSF PFHESLNHDL AIRRFCPARV EQEQGGEWEE ILNEIEFSSP SETTSPPCLP  60
ASEVDDFVDS FINMDHCRDD DIQSLEKQQS FDYYDQDGNE TFSMVDDMYG DVLMMMEGDD  120
MEMGGLAEDF GVGETNMVSS VEEVSHGVDQ GLHLVHMLLA CAEAVGCRDT KLAESLLSQI  180
WASVSPWGDS LQRVSSCFAM GLRSRLSLLH NVNINGTFNN DTMDVSLTSR EEKLEAFQLL  240
NQTTPYIAFG FMVANEAICQ AAQGKENLHI IDLGMEHTLQ WPSLIRTLAS RPEGPPKKLR  300
ITGLVEDHNV FELEAGMKAL VEEASSLGIP TEFNMISEPV KPSLLTRENL DLREGEALFV  360
NSIMHLHKYV KESRGSLKAI LQALKKLGPT VLTLVEQDAN HNGPFFLGRF LESLHFYSAI  420
FDSLEASLPR NSPQRMKIER QHFADEIRNI VAFEGLNRIE RHERADQWRR QLGRAGFQVM  480
GLKCTSQARM MLSVYGCDGY TLASEKGCLL LGWKGRPIML ASAWQVHNAS SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-80GRAS family protein