PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g322980.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 610aa MW: 71010.8 Da PI: 7.2926 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.6 | 4.3e-18 | 22 | 71 | 2 | 52 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvk 52 pGfrFhPtdeelv +yL++kve+k +++ e ik++diyk++PwdLp+ ++ Pd.00g322980.m01 22 LPGFRFHPTDEELVEFYLRRKVEKKAISI-ELIKSIDIYKHDPWDLPNIHR 71 59***************************.89**************95322 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 610 aa Download sequence |
MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK 60 HDPWDLPNIH RGSNTKNINS TDPQQEAEIW TLCRIFKRNV SYKKYTADWR GLSGAKRHPM 120 DTVSSKKCTS DQDDLDQSNN YISFGASDNI ICYEEKKPVV NHTNMNNFNG NNQQLHAVGQ 180 LSSNMPATYP YMETFSNFSY QDLENELLNE NWDELRSAAI HLAFDPTHGV DQTVNVDVKR 240 KKKERDGRRR SRGSGAPMLK HYWVAFFVVV SWVVNFRVLD ASAGDADPLY RACVKQCGET 300 GCVAQRCFPQ CNFSSDGVSV DGPWYMQEPL YMQWKQWDCQ SDCRYYCMLD RENEREATGH 360 DPVKYHGKWP FKRVYGIQEP ASVAFSVLNL AMHFHGWISF FILLYYKLPL RRDKKTYYYF 420 ASLWHIYALL SFNSWFWSAV FHSRDVDLTE KLDYSSAVAI LGYSLILSIL RSFDVKDDAV 480 RVMVAAPLLA FVTTHILYLN FYKLDYGWNM QVCVVMAVVQ LLLWAIWAGV TRHPSRWKLW 540 LVVVAGGLAM LLEIYDFPPY QGFVDAHAAW HATTIPLTYV WWSFIRDDAE FLTLNQMKRL 600 KTSNLAKKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 3e-21 | NAC family protein |