PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g320140.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NF-YB | ||||||||
Protein Properties | Length: 184aa MW: 20421.9 Da PI: 8.7261 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 161.8 | 9.6e-51 | 63 | 158 | 1 | 96 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqd+++Pianv+rim+++lP +akis+daket+qecvse+i+f+t+ea+++cqre+rkt++++d+lwa+++lGf++yvepl+++l+k+re Pd.00g320140.m01 63 VREQDQYMPIANVIRIMRRILPPHAKISDDAKETIQECVSEYIAFITGEANERCQREQRKTVTAEDILWAMGKLGFDNYVEPLTLFLQKHRES 155 69******************************************************************************************9 PP NF-YB 94 ege 96 e+ Pd.00g320140.m01 156 ENS 158 875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MERMRGPPSS RHAKSSSAQV NNSERSNSKA PINTTPAATN SNAAAAAANA GDPAQLAPQQ 60 SVVREQDQYM PIANVIRIMR RILPPHAKIS DDAKETIQEC VSEYIAFITG EANERCQREQ 120 RKTVTAEDIL WAMGKLGFDN YVEPLTLFLQ KHRESENSDR STLRAEFMKR DRAVDFGPAG 180 PRLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 2e-60 | NF-YB family protein |