PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g319630.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 144aa MW: 15977.1 Da PI: 8.2822 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 42.3 | 1.4e-13 | 24 | 90 | 33 | 99 |
-SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++l+d++gr W++kl+ + ++gr ++t+G +an++ gD++vF+l++rse + +++fr+ Pd.00g319630.m01 24 KERVMLKDPNGRPWNIKLRLSENGGRLLMTQGLVACWQANNISLGDTIVFELVKRSEMDMEIHIFRT 90 3469***************************************************9999******96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MILPCVLTCL PCERRAVAEG LIGKERVMLK DPNGRPWNIK LRLSENGGRL LMTQGLVACW 60 QANNISLGDT IVFELVKRSE MDMEIHIFRT GAGGNMCSVV LDASSSVKYI KPVVQFTSLS 120 NVLLCLDSMY LAPMIKVVCA FLWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00260.1 | 4e-07 | B3 family protein |