PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g318180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 305aa    MW: 34083.2 Da    PI: 4.8441
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g318180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.31.6e-35271172101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d++++++isw+++g+sfvv++++ fa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k+ll
  Pd.00g318180.m01  27 FLTKTYQLVDDPTIDDVISWNDDGSSFVVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVIPDR---------WEFSNDCFRRGEKRLL 110
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i+r++
  Pd.00g318180.m01 111 CEIQRRR 117
                       *****96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MAPTSVEPNG GESTSGESSH RALPTPFLTK TYQLVDDPTI DDVISWNDDG SSFVVWNPTV  60
FARDLLPKYF KHNNFSSFVR QLNTYGFRKV IPDRWEFSND CFRRGEKRLL CEIQRRRIMP  120
PAPSVAVSPM ATAAVVPNAK PMISPSNSGE EQVISSSSSP IRAPSELMDE NEKLRKENMQ  180
LTKELAEVKS LCNNIFSMVS NYAYAQSETE SGFPYVKPLD LMPEKRFSGD GEKEEEEASP  240
KLFGVAIGAK RARETVGDGV EEDETGLRLQ QPSGGGDVKS EPIDVDRQET PWLNQRHMAN  300
QRVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.13e-94HSF family protein