PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g312780.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 425aa MW: 47011.9 Da PI: 4.3145 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 80.4 | 3.7e-25 | 9 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 +p Gf+F+P+d+el+ +yL +kv+g++++ ++v++e+++y k ePwd+ + + ++ +++yfF+k + + +g+r r++ +g+Wk k Pd.00g312780.m01 9 VPIGFKFRPSDDELLRYYLLNKVSGTPFKYSNVVPEFNLYgKKEPWDIWNdfggQNLEKGEDLYFFTKLKLVTGKGSRVARTIGNGTWKGEDK 101 589***************************9*******99456*****753444333356789**************************9999 PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +v + k++ gl k + + ++++ ++ W+mhey+l Pd.00g312780.m01 102 GATVRDPakKNTPLGLCKRFRYE--NEKSDQHGCWIMHEYSL 141 99999876566679999**9998..44455699*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MAPCEYADVP IGFKFRPSDD ELLRYYLLNK VSGTPFKYSN VVPEFNLYGK KEPWDIWNDF 60 GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED KGATVRDPAK KNTPLGLCKR 120 FRYENEKSDQ HGCWIMHEYS LHPSLVKPQS NSNTCGCDGK YVLCRIRKND RKRKLSENDG 180 VGGHALILQS PTKIPRQLES SDEVVLGANS TPISEASEVT NHYNQQPEQT TTANAYLPMD 240 QPHYFLTDYP TTMASASTSP PPSLPQPDYG FELISDTDHQ PAQGAGFNYD LSQFLDSDDV 300 DALLKDLSNL DNIQPLTAQP LGGGSHPYPC IIEESAVDED SGNINTGLGI SSEDQTGGEL 360 GNENVSLNVS GFPVHDDEML DFLNCASFDD LVDMIQFEDN DDELQGFAKS ESVMGMESTT 420 TATTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17260.1 | 1e-19 | NAC family protein |