PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g305800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 322aa    MW: 35149.9 Da    PI: 6.8347
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g305800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.1e-17216250135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  Pd.00g305800.m01 216 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 250
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MELPEFYLGG YFDAGAADFL PEKKPAAAGD QFTVDDLLDF SNEDALVAGG GFLDPAADSS  60
AVTAVDSCNS SVSGGEPQFS SNRSFGDSQF SGDLCVPHDD LAELEWLSNF VEDSFSAEKD  120
LQALQFLSMT TTKPRTPETS SSSETNQNAP LFHSETPLPG KARSKRSRAA PGDWSTRLLH  180
LTPNDTIKPP KTTTCKKKDG IVGNSNSGSD SSGRKCLHCA AEKTPQWRTG PMGPKTLCNA  240
CGVRYKSGRL VPEYRPAASP TFVSARHSNS HRKVLELRRQ KEVHRSHQHQ FLSQSSIFGV  300
SNGGHDEYLI HHHKVNDFRQ MM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.17e-73GATA family protein