PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g301270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 344aa    MW: 38472.1 Da    PI: 9.243
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g301270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-20155204356
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  Pd.00g301270.m01 155 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 204
                       8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDGKFPKLET FIEKQLPSYF PRMASDIRSN LFGDPAIWCG SGSKSSLSPE SSSSSTEEFS  60
SSGSNLIDNM PGLTKSPFVP VNFLETFPQL SRVQVSDQPP SHSSKGFNDY WLSTTKTQPM  120
KRTGRSSRLQ QQINQHHKQP HNNLSSASSS PGKLFRGVRQ RHWGKWVAEI RLPRNRTRVW  180
LGTFDTAEEA AIAYDTAAYM LRGEHAHLNF PDLKHQLKAN ALKGNTAALL EAKLQAISSS  240
QAHQKAIMES KSSQLASPNK HSADDHDDHK YSNLMINSNF SQNPTRKEWQ YGLESKVGSD  300
HQVVIESKKS QQELVSADVD AVQLSRMPSL DMDMIWDALL VSDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.17e-53ERF family protein