PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g296490.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | HSF | ||||||||
Protein Properties | Length: 412aa MW: 46550.7 Da PI: 5.3441 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 108.1 | 6.8e-34 | 14 | 105 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sws++++sf+v ++ efa+++Lpk+Fkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +l+ Pd.00g296490.m01 14 FLSKTYDMVDDASTDSIVSWSASNKSFIVRNPPEFARDLLPKFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFIRGQPHLM 97 9********************999****************************************9998.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k Pd.00g296490.m01 98 KNIHRRKP 105 *****985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 412 aa Download sequence |
MDEVQGGASS LPPFLSKTYD MVDDASTDSI VSWSASNKSF IVRNPPEFAR DLLPKFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFANDDFI RGQPHLMKNI HRRKPVHSHS LQNLQVQGNG 120 TSLSESERQS MKDEIERLKH EKERLGVELQ RHEQERQGLE LQMQFLKERL QHMERQQQTM 180 ASFVARVLQK PGIASNPVPQ LEVHGRKRRL PRIGWSYDEA SNGNNQVASS QAGIRENADV 240 EKLEQLESFL TFWEDTIFDV GEAHIQVVSN VELDESTSCV ESAAISSIQL NVDAQPKSPG 300 IDMNSEPAVV VAPEPAAAVP PEPASSKQQS SKEQTSGITA STTTGVNDLF WEHFLTENPG 360 SVEAQEVQLE KRDSDGRKNE SKPGDHGKLW WNMRNVNNLT EQMGHLTPVE KT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18880.1 | 1e-126 | HSF family protein |