PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g295530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 222aa MW: 24946.7 Da PI: 10.0176 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.1 | 0.00037 | 172 | 208 | 13 | 54 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 R+++++ Lr ++P + ++ +++L +Av+Y+ksL Pd.00g295530.m01 172 RQKMKKMVRVLRGIVPGgN------EMNTVDVLDEAVQYLKSL 208 7889999999999999855......8***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MNIGVTFKRY RAIKEVGKII MSVGVIAYYQ LMQVCQAEYF RQLLKPVTQL SCTRMRDQQF 60 DPNKAAPPFA NQVGNNYMHI PVASARGAVL PHEAKHIKPF HGVEFQTSDI CPKNFIIFDQ 120 TDHRTRTHGN YGSMSPDSCS NYGLKTKKNR QCSSLGKSSG IGSSSCNSER KRQKMKKMVR 180 VLRGIVPGGN EMNTVDVLDE AVQYLKSLKV ELQNLGVENL ND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 9e-13 | bHLH family protein |