PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g275700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 195aa MW: 22035.2 Da PI: 8.4974

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g275700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.4e-18	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++++G g+W++ ++ g++R++k+c++rw +yl Pd.00g275700.m01 13 KGAWSKQEDQKLIDYIQKHGEGCWNSLPKAAGLRRCGKSCRLRWINYL 60 79********************************************97 PP
2	Myb_DNA-binding	35.3	2.6e-11	66	102	1	39
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 rg++ ++E++l+++++++lG++ W++Ia +++ gRt+++ Pd.00g275700.m01 66 RGSFGEDEEDLIIRLHALLGNR-WSLIAGRLP-GRTDNE 102 899*****************.*****.**96 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MRKPCCEKTE ITKGAWSKQE DQKLIDYIQK HGEGCWNSLP KAAGLRRCGK SCRLRWINYL 60 RPDLKRGSFG EDEEDLIIRL HALLGNRWSL IAGRLPGRTD NEKKPHHLDN KVPLLMQPDA 120 RNPILFRPPA TTTDQKRAPN HNDEVDVSDS MSINGGNQLQ TGVIMSNKSC CLPDLNLDLT 180 LSLQLAVGER QQSDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	2e-60	MYB family protein