PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g275530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 335aa MW: 38185.7 Da PI: 7.9539

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g275530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.7	3.6e-22	91	150	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ Pd.00g275530.m01 91 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrkygKIEGKNVFYWFQNHKARERQ 150 7***************99************************************97 PP
2	Wus_type_Homeobox	115.8	2e-37	90	152	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ Pd.00g275530.m01 90 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRKYGKIEGKNVFYWFQNHKARERQKR 152 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MWMMGYNESG HADFNMPDSF NGRKLRPLIP RPLVPSANNA TSSVTAATPP CLNRIHGISH 60 DFFTQYHHLA AMAEQNKRSE FINTPQVVVS SRWNPTPEQL RALEELYRRG TRTPSAEQIQ 120 HITAQLRKYG KIEGKNVFYW FQNHKARERQ KRRRQMESSV PSVQPDHEIS LSSTDHQKKE 180 SLGASRTVFE VEQTKNWAPS TNCNHTCDWS THALLWSDIC SIEMSTLAWD CTASRAATVR 240 PVDQRLIKGH DLSILLAPYS SISEEFGFIN FNHSNHNTNV EQDHGCGESQ TLQLFPLRSG 300 HANANANLEK DHAELSANFS RAQPYPFFEF LPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	7e-55	WOX family protein