PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g274890.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 453aa MW: 52038 Da PI: 7.0959

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g274890.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+++W++Ia++++ gR++k+c++rw++ Pd.00g274890.m01 4 RGHWRPAEDEKLRELVERYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49 899***************************.*********996 PP
2	Myb_DNA-binding	53.6	5.1e-17	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+ Pd.00g274890.m01 56 RNPFTEEEEERLLASHRIHGNR-WAIIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MCTRGHWRPA EDEKLRELVE RYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRNPFT 60 EEEEERLLAS HRIHGNRWAI IARLFPGRTD NAVKNHWHVI MARRCRERSR LHAKLIRTSS 120 TTSTALPQSS LTTSNINIDI PKSSSKQDHL QINYHKDQPI EFYDFLQVNT ESNGSEVIDN 180 ARKDEEEVDQ EAVGQQISKA AGSSTYKDEN SIVWTGDEAY IHNKHESQVF NEYYSSNTPV 240 DWTSTVRVFP TLNKNCYTIP IGKYGERLLV RASFRYWDFY YNLNYSATSP GPTFELQFDG 300 NYWTTVVTKP YDIVSYEAIY VAKANTTSIC VAKTKHNQLP FISALELRSL DFKMYSHVDS 360 NYALLLANRH TDGTNQTVRY PDDAYDRIWV PANGFTVTEN VKGEARSIDT SSAQDNPPEA 420 VLQNAMETIG TLWSLVLEPA DVHNHKIKKC AST

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MCTRGHWRPA EDEKLRELVE RYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRNPFT  60
EEEEERLLAS HRIHGNRWAI IARLFPGRTD NAVKNHWHVI MARRCRERSR LHAKLIRTSS  120
TTSTALPQSS LTTSNINIDI PKSSSKQDHL QINYHKDQPI EFYDFLQVNT ESNGSEVIDN  180
ARKDEEEVDQ EAVGQQISKA AGSSTYKDEN SIVWTGDEAY IHNKHESQVF NEYYSSNTPV  240
DWTSTVRVFP TLNKNCYTIP IGKYGERLLV RASFRYWDFY YNLNYSATSP GPTFELQFDG  300
NYWTTVVTKP YDIVSYEAIY VAKANTTSIC VAKTKHNQLP FISALELRSL DFKMYSHVDS  360
NYALLLANRH TDGTNQTVRY PDDAYDRIWV PANGFTVTEN VKGEARSIDT SSAQDNPPEA  420
VLQNAMETIG TLWSLVLEPA DVHNHKIKKC AST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-85	MYB family protein