PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g272130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 401aa MW: 45201.8 Da PI: 4.4726

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g272130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.8	2.5e-24	34	166	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 p+Gf+F+P+d++l+ +yL +kv+g+++ ++vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r r++ sg+Wk + Pd.00g272130.m01 34 PVGFKFRPSDDQLLGYYLLNKVRGTSFMYDNVIPEMDLYgKIEPWDIWHeygghNNLAKGEDLYFFTKLKSLSDKDSRVARTIGSGTWKGENS 126 89***********************99999*99568*7434443222356789**********************9988 PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + v + ++++ g+ k + + + ++ + W+mhey+l Pd.00g272130.m01 127 GTVVSDPknEESDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 166 77777765566669999998886..566667999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MLNHTFGTKS YARSKAQYAE MQENFKGLVE DECPVGFKFR PSDDQLLGYY LLNKVRGTSF 60 MYDNVIPEMD LYGKIEPWDI WHEYGGHNNL AKGEDLYFFT KLKSLSDKDS RVARTIGSGT 120 WKGENSGTVV SDPKNEESDL GIWKRFHYEN PKSVQDGCWI MHEYSLHPSL VKPTNQFVLC 180 RIRKNDRGKR KLRTAEEDNE TDTPVQSQNK RQRLQQVTSF EELIGNCTPM SEATGVGGSV 240 SYLPTELTQS QPASSFAYPT TMVSSQARAN YTDEINQFHG AGEGDALMSD FSHLDTAQPF 300 TEQALGSYAV CNQERASDVY ETQQGLGLTD NNIGYWPSTF RSEEDQVNAI DFSMDYDLLN 360 HLINCDDDND GPQQSSTAQF MGMGMENTTT ASSEVNMVII D

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MLNHTFGTKS YARSKAQYAE MQENFKGLVE DECPVGFKFR PSDDQLLGYY LLNKVRGTSF  60
MYDNVIPEMD LYGKIEPWDI WHEYGGHNNL AKGEDLYFFT KLKSLSDKDS RVARTIGSGT  120
WKGENSGTVV SDPKNEESDL GIWKRFHYEN PKSVQDGCWI MHEYSLHPSL VKPTNQFVLC  180
RIRKNDRGKR KLRTAEEDNE TDTPVQSQNK RQRLQQVTSF EELIGNCTPM SEATGVGGSV  240
SYLPTELTQS QPASSFAYPT TMVSSQARAN YTDEINQFHG AGEGDALMSD FSHLDTAQPF  300
TEQALGSYAV CNQERASDVY ETQQGLGLTD NNIGYWPSTF RSEEDQVNAI DFSMDYDLLN  360
HLINCDDDND GPQQSSTAQF MGMGMENTTT ASSEVNMVII D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	193	RGKRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	2e-16	NAC family protein