PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g269390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 418aa MW: 47051.1 Da PI: 5.2488

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g269390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.8	2e-18	100	189	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +kv++ps+v+ +l++pkkf +h ++++++++lede+g+++e k+ ++k++ l++GW++F a++L +gD+v+F+++ f+ +v Pd.00g269390.m01 100 LKVMMPSHVTGGFCLSIPKKFSCQHL--PKQDTMIILEDEDGKEFETKYLVEKGG----LSGGWRGFSIAHKLLQGDIVIFHVV--APFKIKV 184 69*****************86774..45788************666666....9********************65..5899999 PP EEE-S CS B3 95 kvfrk 99 ++r+ Pd.00g269390.m01 185 YIVRS 189 98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MAMREPMAVL QDQNRNFSYP PSETMKMEKL FGQKSSCLEL MALSNVVNVN PIMSQSHKRK 60 RVITRVKVES LYDSSQAQSS VMARAKEVEA SLDPKFPVLL KVMMPSHVTG GFCLSIPKKF 120 SCQHLPKQDT MIILEDEDGK EFETKYLVEK GGLSGGWRGF SIAHKLLQGD IVIFHVVAPF 180 KIKVYIVRSN GLDEVDCVHG LMRLDACTKQ IDAGQIIPYE TEKSGPVSDQ SENDIEDLGF 240 EFMDGLRLAE SDVTFKEVKC MENFTVVVNG LVINSEFSNY ILTKYYELCY SQNAFLHEHL 300 LEGLNCKLIA GVISETVNIA DAIRACKITT TEGDFSTWSK TLKAFEDLGM NASFLRAQLD 360 RLASLASESK RLKEARLEKD HPEEEMRSLD ANPLEVKETI NMTSILELTF QEVAKSPW

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MAMREPMAVL QDQNRNFSYP PSETMKMEKL FGQKSSCLEL MALSNVVNVN PIMSQSHKRK  60
RVITRVKVES LYDSSQAQSS VMARAKEVEA SLDPKFPVLL KVMMPSHVTG GFCLSIPKKF  120
SCQHLPKQDT MIILEDEDGK EFETKYLVEK GGLSGGWRGF SIAHKLLQGD IVIFHVVAPF  180
KIKVYIVRSN GLDEVDCVHG LMRLDACTKQ IDAGQIIPYE TEKSGPVSDQ SENDIEDLGF  240
EFMDGLRLAE SDVTFKEVKC MENFTVVVNG LVINSEFSNY ILTKYYELCY SQNAFLHEHL  300
LEGLNCKLIA GVISETVNIA DAIRACKITT TEGDFSTWSK TLKAFEDLGM NASFLRAQLD  360
RLASLASESK RLKEARLEKD HPEEEMRSLD ANPLEVKETI NMTSILELTF QEVAKSPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	9e-35	B3 family protein