PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g266130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 717aa MW: 78136.3 Da PI: 5.8919

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g266130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.4e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ +++da k++G W +I +++g ++t+ q++s+ qk+ Pd.00g266130.m01 24 RERWTEEEHNRFLDALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 717 aa Download sequence
MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV 120 AEKDGKLLSS TSSSHCKQAV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTMLLEDHC 180 SSVSSANKNS IPTQVAHRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK 240 KIVQDNGTSG ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS 300 LGACSQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT TEHETHAAAS FAATFWPYAN 360 AENTEDSPTC SPGGFPSRQM NSPPSMAAIA AATVAAASAW WASHGLLPLC APVQTAFSCP 420 PVSMTGVPSM DTGEAPAANI ERGENSLQIP SLQDQVDPEH VEAVEAQHPA SKSPSMSSSH 480 SDNGGAEPNT VLKAAADEKM VASTEEVNND SNNAKSRKQV DRSSCGSNTP SSSEVETDAL 540 EKQEKGKEEL KEPDLNHPAC DSTYRRSRSI INISDPWKEV SEEGRMAFQA LFSREVLPQS 600 FSPPPKDKEH QTTTEEGKQN AEEKDEDASL LDLNKKTWVP FSCHPEVEKN VSPVGDNNAE 660 GLLTIGLSQG KLKARRTGFK PYKRCSVEAN ENRAANAIGH SEEKGPKRLR LGGEAQN

Sequence ? help Back to Top

Protein Sequence Length: 717 aa Download sequence

MDTLSSGEDL VIKARKPYTI TKQRERWTEE EHNRFLDALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEAHNKG VLAGQSIDID IPPPRPKRKP SNPYPRKSCS AARTWATSHV  120
AEKDGKLLSS TSSSHCKQAV DLEKEPLDER PTKEENPRNG KENQDENCSE VLTMLLEDHC  180
SSVSSANKNS IPTQVAHRNA CTFTDFVPSL KEVISQDVTN DSYVTTELNG NQNLKKNDAK  240
KIVQDNGTSG ASESENTNAF HKKLVQGEKA DDLNCALPTD GMQGTQTYPR NVPVHVLDGS  300
LGACSQITPA DRSFADTAFH PMGKVHGQPN LFANPTASTT TEHETHAAAS FAATFWPYAN  360
AENTEDSPTC SPGGFPSRQM NSPPSMAAIA AATVAAASAW WASHGLLPLC APVQTAFSCP  420
PVSMTGVPSM DTGEAPAANI ERGENSLQIP SLQDQVDPEH VEAVEAQHPA SKSPSMSSSH  480
SDNGGAEPNT VLKAAADEKM VASTEEVNND SNNAKSRKQV DRSSCGSNTP SSSEVETDAL  540
EKQEKGKEEL KEPDLNHPAC DSTYRRSRSI INISDPWKEV SEEGRMAFQA LFSREVLPQS  600
FSPPPKDKEH QTTTEEGKQN AEEKDEDASL LDLNKKTWVP FSCHPEVEKN VSPVGDNNAE  660
GLLTIGLSQG KLKARRTGFK PYKRCSVEAN ENRAANAIGH SEEKGPKRLR LGGEAQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	1e-98	MYB_related family protein