PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g260500.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 378aa MW: 41513 Da PI: 6.9681 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.1 | 3.4e-32 | 188 | 241 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Pd.00g260500.m02 188 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 241 9****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 46.8 | 6.8e-15 | 189 | 240 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Pd.00g260500.m02 189 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 240 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MPLEGIFIEP SSTTTSPLPD LSLHISPPNT SSSSSSIFNT TSGEPQISTT NSQAHTELSL 60 GRRFTGGAHE EPPQKPYHHH QQQSLPLYRS SNHLSHINNG VSLLDVSSSS GLRPIKGIPV 120 YQHRPFPFLP TENMIPRDHP KDSKMCFYQR PPPSYNLPSL PSASCSSNTP STPYFGGGLD 180 PMSSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR 240 TVKTTDKPAA SSDGSGEDDI LSPIGSATDL HGLRSPNQFP EQRGPSDRSS VQPDLDYTSS 300 TTLWSNSSSR EAFPHTSSHD MDGLTPVSSQ LQKISGHQIQ ECDSTTQLKS YLGSNFETRN 360 PSLEFTLGRP DWNGKPHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 1e-54 | G2-like family protein |